STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ldhL-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. (341 aa)    
Predicted Functional Partners:
KWZ75225.1
Pyruvate kinase; KEGG: bbb:BIF_00125 1.4e-195 Pyruvate kinase K00873; Psort location: Cytoplasmic, score: 7.50.
  
 0.987
pgi
Glucose-6-phosphate isomerase; Psort location: Cytoplasmic, score: 9.67; Belongs to the GPI family.
  
 
 0.969
KWZ72824.1
2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate).
   
 0.959
KWZ72657.1
Citrate synthase 2; KEGG: sgt:SGGB_0689 7.6e-163 citZ; citrate synthase K01647; Psort location: Cytoplasmic, score: 9.97.
  
 0.957
KWZ73530.1
KEGG: bad:BAD_0992 0. pfl; formate acetyltransferase; K00656 formate C-acetyltransferase; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.956
KWZ75395.1
Putative aspartate transaminase; KEGG: bad:BAD_0244 2.0e-153 aspC; aspartate aminotransferase; Psort location: Cytoplasmic, score: 7.50.
  
 0.955
KWZ73467.1
Transketolase; KEGG: gva:HMPREF0424_0902 0. tkt; transketolase K00615; Psort location: Cytoplasmic, score: 7.50; Belongs to the transketolase family.
  
 0.955
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
   
 0.953
KWZ75338.1
Fructose-bisphosphate aldolase, class II; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
   
 
 0.950
KWZ73368.1
Acetolactate synthase, small subunit; Psort location: Cytoplasmic, score: 7.50.
   
 0.948
Your Current Organism:
Alloscardovia omnicolens
NCBI taxonomy Id: 419015
Other names: A. omnicolens, Alloscardovia omnicolens Huys et al. 2007, CCUG 31649, DSM 21503, LMG 23792, LMG:23792
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.