STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ73823.1Putative ATP synthase F0, A subunit; KEGG: ase:ACPL_5256 4.6e-47 Macrolide export ATP-binding/permease protein macB K02004; Psort location: CytoplasmicMembrane, score: 10.00. (884 aa)    
Predicted Functional Partners:
KWZ73822.1
KEGG: bde:BDP_1495 5.8e-69 ABC transporter ATP-binding protein K02003; Psort location: CytoplasmicMembrane, score: 9.99.
 
  0.974
KWZ74506.1
KEGG: bde:BDP_0168 3.8e-97 ABC transporter ATP-binding protein K02003; Psort location: CytoplasmicMembrane, score: 8.78.
 
  0.866
KWZ75810.1
ABC transporter, ATP-binding protein; KEGG: gth:Geoth_1313 3.3e-27 phosphonate-transporting ATPase K02003; Psort location: CytoplasmicMembrane, score: 9.51.
 
  0.778
KWZ75413.1
KEGG: bde:BDP_1105 2.3e-90 ABC transporter ATP-binding protein K02003; Psort location: CytoplasmicMembrane, score: 8.78.
 
  0.778
KWZ75822.1
KEGG: efl:EF62_2234 4.3e-105 ABC transporter family protein K02003; Psort location: CytoplasmicMembrane, score: 9.51.
 
  0.758
KWZ74504.1
Efflux ABC transporter, permease protein; KEGG: rsl:RPSI07_mp1434 5.6e-11 macrolide export ATP-binding/permease macb (macb) K02004; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.504
KWZ75127.1
Hypothetical protein.
  
     0.464
xylA
Xylose isomerase; KEGG: bde:BDP_0561 4.0e-221 xylose isomerase K01805; Psort location: Cytoplasmic, score: 9.97; Belongs to the xylose isomerase family.
       0.459
KWZ74503.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.454
KWZ72388.1
Putative D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; KEGG: bad:BAD_0407 2.3e-74 hypothetical protein; K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4); Psort location: Extracellular, score: 9.72.
  
     0.447
Your Current Organism:
Alloscardovia omnicolens
NCBI taxonomy Id: 419015
Other names: A. omnicolens, Alloscardovia omnicolens Huys et al. 2007, CCUG 31649, DSM 21503, LMG 23792, LMG:23792
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