STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ73645.1Putative oligopeptide transport system permease protein OppB; KEGG: amt:Amet_2908 2.0e-52 nickel-transporting ATPase K02033; Psort location: CytoplasmicMembrane, score: 10.00. (309 aa)    
Predicted Functional Partners:
KWZ73646.1
Putative oligopeptide ABC transporter, permease protein OppC; KEGG: apb:SAR116_0601 5.4e-43 binding-protein-dependent transport system inner membrane protein K02034; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.991
KWZ72303.1
ABC transporter, substrate-binding protein, family 5; KEGG: smd:Smed_3647 1.1e-37 4-phytase K02035; Psort location: Cellwall, score: 9.20.
  0.984
KWZ75910.1
KEGG: gvg:HMPREF0421_20178 9.4e-268 ABC transporter ATP-binding protein K02031:K02034; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 0.981
KWZ73647.1
Putative phosphonate C-P lyase system protein PhnK; KEGG: bde:BDP_1489 1.4e-243 oppD2; peptide ABC transporter ATP-binding protein K02031:K02032; Psort location: CytoplasmicMembrane, score: 9.96.
 
 0.978
KWZ75743.1
ABC transporter, permease protein; KEGG: bra:BRADO1095 2.1e-34 oppC; peptide ABC transporter membrane protein K02034; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.964
KWZ73644.1
ABC transporter, substrate-binding protein, family 5; KEGG: kra:Krad_1125 3.7e-122 4-phytase K02035; Psort location: Cellwall, score: 9.21.
 
 0.964
KWZ72301.1
KEGG: bra:BRADO2619 1.1e-35 ABC transporter permease K02034; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.954
KWZ72362.1
ABC transporter, substrate-binding protein, family 5; KEGG: kra:Krad_1125 4.7e-115 4-phytase K02035; Psort location: Cellwall, score: 9.21.
 
 0.939
KWZ72299.1
ABC transporter, ATP-binding protein; KEGG: axy:AXYL_01589 1.1e-42 ABC transporter; Psort location: CytoplasmicMembrane, score: 9.96.
 
  0.902
KWZ72300.1
KEGG: bde:BDP_0666 3.6e-60 ABC transporter ATP-binding protein K02031; Psort location: CytoplasmicMembrane, score: 8.78.
 0.901
Your Current Organism:
Alloscardovia omnicolens
NCBI taxonomy Id: 419015
Other names: A. omnicolens, Alloscardovia omnicolens Huys et al. 2007, CCUG 31649, DSM 21503, LMG 23792, LMG:23792
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