STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ73693.1Peptidase dimerization domain protein; KEGG: afn:Acfer_0764 5.6e-80 peptidase M20; K01295 glutamate carboxypeptidase; Psort location: Cytoplasmic, score: 7.50. (390 aa)    
Predicted Functional Partners:
KWZ73692.1
Hypothetical protein; KEGG: syp:SYNPCC7002_G0145 0.0054 atpC-II; ATP synthase epsilon subunit; K02114 F-type H+-transporting ATPase subunit epsilon; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.828
trpB
Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
  
    0.617
argG
KEGG: bni:BANAN_03590 2.3e-200 argininosuccinate synthase K01940; Psort location: Cytoplasmic, score: 7.50; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
 0.564
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
  
 0.559
glmS
Glutamine-fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
   
 
 0.553
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
   
 0.480
KWZ73690.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.446
KWZ73450.1
Dihydroorotase family protein; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
  
 
 0.412
KWZ73433.1
Branched-chain-amino-acid transaminase; KEGG: blo:BL0852 1.8e-163 ilvE; branched-chain amino acid aminotransferase K00826.
  
 0.401
Your Current Organism:
Alloscardovia omnicolens
NCBI taxonomy Id: 419015
Other names: A. omnicolens, Alloscardovia omnicolens Huys et al. 2007, CCUG 31649, DSM 21503, LMG 23792, LMG:23792
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.