STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ73728.1Putative membrane protein; KEGG: bqy:MUS_4455 5.8e-46 ydeD; phosphate acetyltransferase (phosphotransacetylase); Psort location: CytoplasmicMembrane, score: 10.00. (308 aa)    
Predicted Functional Partners:
KWZ73729.1
RNA methyltransferase, RsmE family; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
     
 0.743
KWZ73731.1
PhoH family protein; KEGG: cnc:CNE_1c05490 5.4e-66 phoH; phosphate starvation-inducible protein PhoH K06217; Psort location: Cytoplasmic, score: 9.97.
       0.573
KWZ73730.1
KEGG: bde:BDP_1040 6.2e-33 histidine triad (hIT) protein K02503; Psort location: Cytoplasmic, score: 7.50.
       0.569
ybeY
Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
       0.529
KWZ73733.1
CBS domain protein; KEGG: eci:UTI89_C0656 2.3e-35 ybeX; transport protein K06189; Psort location: CytoplasmicMembrane, score: 9.99.
       0.529
pheT
KEGG: bde:BDP_1298 0. pheT; phenylalanyl-tRNA synthetase subunit beta K01890; Psort location: Cytoplasmic, score: 9.97.
  
   0.525
KWZ74725.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.476
KWZ74009.1
KEGG: gva:HMPREF0424_0254 0. adh; aldehyde-alcohol dehydrogenase 2 K04072; Psort location: Cytoplasmic, score: 9.97; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.419
aroB
3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family.
     
 0.400
Your Current Organism:
Alloscardovia omnicolens
NCBI taxonomy Id: 419015
Other names: A. omnicolens, Alloscardovia omnicolens Huys et al. 2007, CCUG 31649, DSM 21503, LMG 23792, LMG:23792
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.