STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ73448.1KEGG: bad:BAD_0759 2.5e-109 pyrB; aspartate carbamoyltransferase catalytic subunit K00609; Psort location: Cytoplasmic, score: 9.97; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. (260 aa)    
Predicted Functional Partners:
carB
KEGG: blm:BLLJ_1378 0. carbamoyl phosphate synthase large subunit; K01955 carbamoyl-phosphate synthase large subunit; Psort location: Cytoplasmic, score: 9.97; Belongs to the CarB family.
 
 0.999
carA
KEGG: bbi:BBIF_1245 6.8e-162 carA; carbamoyl-phosphate synthase small subunit; K01956 carbamoyl-phosphate synthase small subunit; Psort location: Cytoplasmic, score: 7.50; Belongs to the CarA family.
 
 0.999
KWZ73449.1
Aspartate carbamoyltransferase regulatory chain, allosteric domain protein; KEGG: bbp:BBPR_0938 1.1e-44 pyrI; aspartate carbamoyltransferase K00610; Psort location: Cytoplasmic, score: 7.50.
 
 0.999
KWZ73450.1
Dihydroorotase family protein; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
 0.999
pyrF
KEGG: bbv:HMPREF9228_0890 1.4e-92 pyrF_1; orotidine 5'-phosphate decarboxylase K01591; Belongs to the OMP decarboxylase family. Type 2 subfamily.
 
 
 0.999
KWZ73452.1
Oxidoreductase NAD-binding domain protein; KEGG: bde:BDP_1094 1.7e-78 dihydroorotate dehydrogenase electron transfer subunit K02823; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.993
pyrD
Putative dihydroorotate oxidase, catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate.
 
 
 0.987
KWZ73304.1
Permease, cytosine/purine, uracil, thiamine, allantoin family; KEGG: rge:RGE_20520 0.0031 integral membrane sensor signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the purine-cytosine permease (2.A.39) family.
   
    0.968
KWZ75423.1
Dihydroorotate dehydrogenase 2; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
 
 
 0.966
KWZ74729.1
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
  
 0.966
Your Current Organism:
Alloscardovia omnicolens
NCBI taxonomy Id: 419015
Other names: A. omnicolens, Alloscardovia omnicolens Huys et al. 2007, CCUG 31649, DSM 21503, LMG 23792, LMG:23792
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