STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
whiAHypothetical protein; Involved in cell division and chromosome segregation. (319 aa)    
Predicted Functional Partners:
KWZ73461.1
Hypothetical protein; Displays ATPase and GTPase activities.
 
  
 0.914
KWZ73465.1
Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
 
   
 0.889
pgk
Phosphoglycerate kinase; KEGG: gvh:HMPREF9231_0796 1.7e-174 pgk; phosphoglycerate kinase K00927; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.828
KWZ73617.1
Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: bbp:BBPR_0587 8.3e-157 gap; glyceraldehyde 3-phosphate dehydrogenase Gap K00134; Psort location: Cytoplasmic, score: 9.97; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
     
 0.767
KWZ73542.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.765
KWZ73495.1
Hypothetical protein; KEGG: dme:Dmel_CG13876 0.0054 CG13876 gene product from transcript CG13876-RA; Psort location: Cytoplasmic, score: 7.50.
  
   
 0.740
rbpA
Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.
  
     0.735
nagB
Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily.
   
  
 0.731
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
     
 0.728
crgA
Putative septation inhibitor protein; Involved in cell division; Belongs to the CrgA family.
      
 0.714
Your Current Organism:
Alloscardovia omnicolens
NCBI taxonomy Id: 419015
Other names: A. omnicolens, Alloscardovia omnicolens Huys et al. 2007, CCUG 31649, DSM 21503, LMG 23792, LMG:23792
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.