STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ73475.1CDP-alcohol phosphatidyltransferase; KEGG: bad:BAD_0801 4.8e-58 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Psort location: CytoplasmicMembrane, score: 10.00. (207 aa)    
Predicted Functional Partners:
KWZ73565.1
KEGG: bad:BAD_1028 8.2e-63 pgsA3; DP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.968
KWZ73500.1
KEGG: bde:BDP_1186 6.7e-52 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.964
KWZ73508.1
KEGG: bde:BDP_1197 1.7e-76 cdsA; CdsA phosphatidate cytidylyltransferase K00981; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
  0.963
KWZ73474.1
Histidine triad domain protein; KEGG: paw:PAZ_c11260 1.4e-44 AP-4-A phosphorylase; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.877
KWZ72827.1
KEGG: bad:BAD_0158 1.6e-169 myo-inositol-1-phosphate synthase; K01858 myo-inositol-1-phosphate synthase; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.770
thrS
threonine--tRNA ligase; KEGG: gvh:HMPREF9231_0875 6.6e-299 thrS; threonine--tRNA ligase K01868; Psort location: Cytoplasmic, score: 10.00; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
  
 0.736
KWZ73476.1
DNA-binding regulatory protein, YebC/PmpR family; KEGG: rdn:HMPREF0733_12022 9.8e-67 glucose-1-phosphate adenylyltransferase; Psort location: Cytoplasmic, score: 7.50.
       0.688
ruvC
Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.
       0.687
ruvA
Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.
  
    0.569
ruvB
Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.
  
    0.569
Your Current Organism:
Alloscardovia omnicolens
NCBI taxonomy Id: 419015
Other names: A. omnicolens, Alloscardovia omnicolens Huys et al. 2007, CCUG 31649, DSM 21503, LMG 23792, LMG:23792
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.