Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KWZ73549.1 | KWZ73550.1 | HMPREF3214_01322 | HMPREF3214_01323 | KEGG: apb:SAR116_1990 6.5e-09 major facilitator superfamily protein; Psort location: CytoplasmicMembrane, score: 10.00. | DNA gyrase, B subunit protein; KEGG: blj:BLD_0298 0. parB; DNA topoisomerase plasmid partition protein B; K02470 DNA gyrase subunit B; Psort location: Cytoplasmic, score: 9.97. | 0.563 |
| KWZ73549.1 | KWZ73809.1 | HMPREF3214_01322 | HMPREF3214_01034 | KEGG: apb:SAR116_1990 6.5e-09 major facilitator superfamily protein; Psort location: CytoplasmicMembrane, score: 10.00. | Phospholipase D domain protein; KEGG: rho:RHOM_11560 2.9e-76 cardiolipin synthase; K06131 cardiolipin synthase; Psort location: CytoplasmicMembrane, score: 9.99. | 0.455 |
| KWZ73549.1 | sigA | HMPREF3214_01322 | HMPREF3214_01324 | KEGG: apb:SAR116_1990 6.5e-09 major facilitator superfamily protein; Psort location: CytoplasmicMembrane, score: 10.00. | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.446 |
| KWZ73550.1 | KWZ73549.1 | HMPREF3214_01323 | HMPREF3214_01322 | DNA gyrase, B subunit protein; KEGG: blj:BLD_0298 0. parB; DNA topoisomerase plasmid partition protein B; K02470 DNA gyrase subunit B; Psort location: Cytoplasmic, score: 9.97. | KEGG: apb:SAR116_1990 6.5e-09 major facilitator superfamily protein; Psort location: CytoplasmicMembrane, score: 10.00. | 0.563 |
| KWZ73550.1 | sigA | HMPREF3214_01323 | HMPREF3214_01324 | DNA gyrase, B subunit protein; KEGG: blj:BLD_0298 0. parB; DNA topoisomerase plasmid partition protein B; K02470 DNA gyrase subunit B; Psort location: Cytoplasmic, score: 9.97. | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.692 |
| KWZ73809.1 | KWZ73549.1 | HMPREF3214_01034 | HMPREF3214_01322 | Phospholipase D domain protein; KEGG: rho:RHOM_11560 2.9e-76 cardiolipin synthase; K06131 cardiolipin synthase; Psort location: CytoplasmicMembrane, score: 9.99. | KEGG: apb:SAR116_1990 6.5e-09 major facilitator superfamily protein; Psort location: CytoplasmicMembrane, score: 10.00. | 0.455 |
| sigA | KWZ73549.1 | HMPREF3214_01324 | HMPREF3214_01322 | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | KEGG: apb:SAR116_1990 6.5e-09 major facilitator superfamily protein; Psort location: CytoplasmicMembrane, score: 10.00. | 0.446 |
| sigA | KWZ73550.1 | HMPREF3214_01324 | HMPREF3214_01323 | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | DNA gyrase, B subunit protein; KEGG: blj:BLD_0298 0. parB; DNA topoisomerase plasmid partition protein B; K02470 DNA gyrase subunit B; Psort location: Cytoplasmic, score: 9.97. | 0.692 |