STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ73563.1DNA-binding helix-turn-helix protein. (177 aa)    
Predicted Functional Partners:
KWZ73564.1
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 1.9e-11 fadD; long-chain-fatty-acid--CoA ligase K03743; Belongs to the CinA family.
    
 0.802
KWZ73542.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.721
KWZ73317.1
KEGG: bbb:BIF_01561 1.4e-69 phosphoglycerate mutase; Psort location: Cytoplasmic, score: 7.50.
  
     0.711
KWZ73562.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.707
rbpA
Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.
  
    0.689
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.675
KWZ73495.1
Hypothetical protein; KEGG: dme:Dmel_CG13876 0.0054 CG13876 gene product from transcript CG13876-RA; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.653
KWZ73565.1
KEGG: bad:BAD_1028 8.2e-63 pgsA3; DP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.653
KWZ75811.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.635
KWZ73544.1
Hypothetical protein.
  
  
 0.610
Your Current Organism:
Alloscardovia omnicolens
NCBI taxonomy Id: 419015
Other names: A. omnicolens, Alloscardovia omnicolens Huys et al. 2007, CCUG 31649, DSM 21503, LMG 23792, LMG:23792
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.