STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ73377.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (96 aa)    
Predicted Functional Partners:
whiB
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
     0.771
KWZ73495.1
Hypothetical protein; KEGG: dme:Dmel_CG13876 0.0054 CG13876 gene product from transcript CG13876-RA; Psort location: Cytoplasmic, score: 7.50.
  
     0.755
KWZ73465.1
Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
  
     0.745
KWZ75725.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.724
KWZ75110.1
KEGG: bbv:HMPREF9228_0747 3.3e-75 holA; DNA polymerase III subunit delta K02340; Psort location: Cellwall, score: 8.19.
  
     0.707
KWZ75966.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.703
KWZ73542.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.699
coaD
Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
       0.689
KWZ73374.1
Putative ACR; Psort location: Cytoplasmic, score: 7.50.
 
     0.688
KWZ73375.1
Hypothetical protein; KEGG: ncr:NCU01912 0.0026 similar to protein O-D-mannosyltransferase; K00728 dolichyl-phosphate-mannose-protein mannosyltransferase.
       0.682
Your Current Organism:
Alloscardovia omnicolens
NCBI taxonomy Id: 419015
Other names: A. omnicolens, Alloscardovia omnicolens Huys et al. 2007, CCUG 31649, DSM 21503, LMG 23792, LMG:23792
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.