STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ73407.1Prenyltransferase, UbiA family; KEGG: gob:Gobs_4565 6.2e-26 1,4-dihydroxy-2-naphthoateoctaprenyltransferase; K02548 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Psort location: CytoplasmicMembrane, score: 10.00. (312 aa)    
Predicted Functional Partners:
KWZ75545.1
KEGG: gvh:HMPREF9231_0431 5.3e-91 hydroxymethylglutaryl-CoA reductase, degradative K00054; Psort location: Cytoplasmic, score: 7.50; Belongs to the HMG-CoA reductase family.
  
 
 
 0.843
gpmA
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
       0.761
lysS
lysine--tRNA ligase; KEGG: bbc:BLC1_0418 3.6e-227 lysyl-tRNA synthetase; K04567 lysyl-tRNA synthetase, class II; Psort location: Cytoplasmic, score: 10.00; Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.642
KWZ73405.1
Hypothetical protein.
       0.539
KWZ73553.1
Polyprenyl synthetase; KEGG: bde:BDP_1413 6.9e-66 idsA; polyprenyl synthase K13787; Psort location: Cytoplasmic, score: 9.97; Belongs to the FPP/GGPP synthase family.
    
 0.530
fni
Isopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
     
  0.499
KWZ72844.1
Methyltransferase domain protein; KEGG: bce:BC2100 1.3e-14 methyltransferase; Psort location: Cytoplasmic, score: 7.50.
    
 0.481
KWZ73403.1
Hypothetical protein.
       0.462
KWZ73404.1
Hypothetical protein.
       0.462
KWZ75871.1
Flavodoxin-like protein; KEGG: bsu:BSU26470 2.2e-37 yrkL; NAD(P)H oxidoreductase K00358; Psort location: Cytoplasmic, score: 7.50.
    
  0.431
Your Current Organism:
Alloscardovia omnicolens
NCBI taxonomy Id: 419015
Other names: A. omnicolens, Alloscardovia omnicolens Huys et al. 2007, CCUG 31649, DSM 21503, LMG 23792, LMG:23792
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