STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ73422.1Hypothetical protein; KEGG: bad:BAD_0390 6.5e-54 ptpA; low molecular weight protein-tyrosine-phosphatase; K01104 protein-tyrosine phosphatase; Psort location: Cytoplasmic, score: 7.50. (150 aa)    
Predicted Functional Partners:
KWZ73421.1
Dihydrofolate reductase; KEGG: bbv:HMPREF9228_1613 5.2e-61 folA; dihydrofolate reductase K00287; Psort location: Cytoplasmic, score: 7.50.
    
  0.770
thyA
Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.
    
  0.725
KWZ73470.1
Fructosamine kinase; KEGG: bbb:BIF_01743 1.6e-96 Fructosamine-3-kinase; Psort location: Cytoplasmic, score: 7.50.
 
     0.687
KWZ75608.1
Hypothetical protein; KEGG: bde:BDP_1936 3.8e-97 thioredoxin domain-containing protein K05838; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.679
KWZ75415.1
Thioredoxin; KEGG: bde:BDP_1812 1.1e-35 trxA; thioredoxin; Psort location: Cytoplasmic, score: 9.67; Belongs to the thioredoxin family.
  
 
 0.679
KWZ72718.1
KEGG: bde:BDP_0465 3.2e-39 if2; translation initiation factor IF-2 K02519; Psort location: Cytoplasmic, score: 9.67.
  
 
   0.647
KWZ75532.1
KEGG: efu:HMPREF0351_12109 0.0038 TetR/AcrR family transcriptional regulator; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.603
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
   
   0.580
ybeY
Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
   0.579
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
    
   0.577
Your Current Organism:
Alloscardovia omnicolens
NCBI taxonomy Id: 419015
Other names: A. omnicolens, Alloscardovia omnicolens Huys et al. 2007, CCUG 31649, DSM 21503, LMG 23792, LMG:23792
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.