STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
coaXPutative pantothenate kinase, type III; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. (254 aa)    
Predicted Functional Partners:
coaD
Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
 
  
 0.959
KWZ74067.1
biotin--[acetyl-CoA-carboxylase] ligase; KEGG: tsh:Tsac_1252 7.9e-26 BirA bifunctional protein, biotin operon repressor, biotin/acetyl-CoA-carboxylase ligase; K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase; Psort location: Cytoplasmic, score: 9.97.
  
    0.769
KWZ72302.1
ABC transporter, permease protein; KEGG: tle:Tlet_0072 7.7e-35 nickel-transporting ATPase K02033; Psort location: CytoplasmicMembrane, score: 10.00.
       0.612
KWZ72301.1
KEGG: bra:BRADO2619 1.1e-35 ABC transporter permease K02034; Psort location: CytoplasmicMembrane, score: 10.00.
       0.603
KWZ72299.1
ABC transporter, ATP-binding protein; KEGG: axy:AXYL_01589 1.1e-42 ABC transporter; Psort location: CytoplasmicMembrane, score: 9.96.
       0.602
tmk
dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
   
   0.578
KWZ72305.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.572
KWZ72303.1
ABC transporter, substrate-binding protein, family 5; KEGG: smd:Smed_3647 1.1e-37 4-phytase K02035; Psort location: Cellwall, score: 9.20.
       0.560
cmk
Ribosome biogenesis GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the cytidylate kinase family. Type 1 subfamily.
  
 
 0.474
KWZ72300.1
KEGG: bde:BDP_0666 3.6e-60 ABC transporter ATP-binding protein K02031; Psort location: CytoplasmicMembrane, score: 8.78.
       0.435
Your Current Organism:
Alloscardovia omnicolens
NCBI taxonomy Id: 419015
Other names: A. omnicolens, Alloscardovia omnicolens Huys et al. 2007, CCUG 31649, DSM 21503, LMG 23792, LMG:23792
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