STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ72345.1Hypothetical protein; KEGG: ase:ACPL_3238 4.5e-06 rpii; DNA-directed RNA polymerase II subunit RPB1; Psort location: CytoplasmicMembrane, score: 10.00. (276 aa)    
Predicted Functional Partners:
KWZ75923.1
Hypothetical protein; KEGG: ase:ACPL_6704 0.00044 protease; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.522
KWZ72344.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.447
Your Current Organism:
Alloscardovia omnicolens
NCBI taxonomy Id: 419015
Other names: A. omnicolens, Alloscardovia omnicolens Huys et al. 2007, CCUG 31649, DSM 21503, LMG 23792, LMG:23792
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.