STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ72348.1Phage portal protein, HK97 family; Psort location: CytoplasmicMembrane, score: 9.55. (370 aa)    
Predicted Functional Partners:
KWZ72347.1
Hypothetical protein.
       0.773
KWZ72346.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.752
KWZ73658.1
Hypothetical protein.
 
     0.696
KWZ72350.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
     
 0.621
KWZ73544.1
Hypothetical protein.
   
   0.598
KWZ75712.1
Glycosyl hydrolase, family 1; KEGG: bbv:HMPREF9228_1715 2.7e-174 putative beta-glucosidase A; K05350 beta-glucosidase; Psort location: Cytoplasmic, score: 9.67; Belongs to the glycosyl hydrolase 1 family.
   
   0.577
KWZ75518.1
Beta-galactosidase; KEGG: cfi:Celf_2783 1.2e-139 beta-galactosidase K05350; Psort location: Cytoplasmic, score: 9.97.
   
   0.577
KWZ72352.1
HNH endonuclease domain protein; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.519
KWZ72351.1
Hypothetical protein; KEGG: xtr:407945 0.0060 mcm7, MGC75610, cdc47, xmcm7; minichromosome maintenance complex component 7 K02210; Psort location: Cytoplasmic, score: 7.50.
       0.494
Your Current Organism:
Alloscardovia omnicolens
NCBI taxonomy Id: 419015
Other names: A. omnicolens, Alloscardovia omnicolens Huys et al. 2007, CCUG 31649, DSM 21503, LMG 23792, LMG:23792
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.