STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ72388.1Putative D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; KEGG: bad:BAD_0407 2.3e-74 hypothetical protein; K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4); Psort location: Extracellular, score: 9.72. (459 aa)    
Predicted Functional Partners:
KWZ72386.1
KEGG: bde:BDP_0548 1.6e-68 hprT; hypoxanthine-guanine phosphoribosyltransferase K00760; Psort location: Cytoplasmic, score: 9.97; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
     
 0.869
tilS
tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.
     
 0.869
KWZ72389.1
Glycosyltransferase, group 2 family protein; KEGG: bnm:BALAC2494_00631 3.0e-143 Hexosyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.708
KWZ72390.1
Hypothetical protein; KEGG: pfe:PSF113_1419 6.5e-15 yfgO; protein YfgO K03548; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.680
folE
GTP cyclohydrolase I; KEGG: bad:BAD_0410 2.6e-73 folE; GTP cyclohydrolase I K01495; Psort location: Cytoplasmic, score: 7.50.
       0.626
ftsH
ATP-dependent metallopeptidase HflB; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
       0.626
KWZ72825.1
Transglycosylase; KEGG: bbp:BBPR_1743 5.9e-195 pbp2; penicillin-binding protein Pbp; Psort location: CytoplasmicMembrane, score: 8.77.
  
   
 0.580
KWZ72391.1
Hypothetical protein; KEGG: bla:BLA_0466 3.1e-63 glycosyltransferase; Psort location: Cytoplasmic, score: 7.50.
       0.536
KWZ72383.1
Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
       0.534
KWZ72382.1
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
       0.527
Your Current Organism:
Alloscardovia omnicolens
NCBI taxonomy Id: 419015
Other names: A. omnicolens, Alloscardovia omnicolens Huys et al. 2007, CCUG 31649, DSM 21503, LMG 23792, LMG:23792
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.