STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANG95862.1TIGR01620 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (363 aa)    
Predicted Functional Partners:
ANG95863.1
Amino acid regulated cytosolic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.991
ANG95452.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.707
ANG95014.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.688
ANG98500.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.665
ANG96757.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.650
ANG95399.1
Invasion associated locus B family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.647
ANG95864.1
Phosphohistidine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.643
ANG95090.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.640
ANG98377.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.615
ANG96479.1
Penicillin-insensitive murein endopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.604
Your Current Organism:
Ochrobactrum pseudogrignonense
NCBI taxonomy Id: 419475
Other names: CCUG 30717, CIP 109451, O. pseudogrignonense, Ochrobactrum pseudogrignonense Kampfer et al. 2007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.