STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANG96328.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (691 aa)    
Predicted Functional Partners:
ANG96327.1
RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.925
ANG96326.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.924
ANG96325.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.889
ANG97988.1
TIGR02302 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
ANG98217.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.675
ANG96324.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.654
ANG98446.1
2-hydroxy-6-oxo-2,4-heptadienoate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.609
A8A54_07330
Beta-hydroxylase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
 
     0.587
ANG95978.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.570
ANG96323.1
Coenzyme A pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.516
Your Current Organism:
Ochrobactrum pseudogrignonense
NCBI taxonomy Id: 419475
Other names: CCUG 30717, CIP 109451, O. pseudogrignonense, Ochrobactrum pseudogrignonense Kampfer et al. 2007
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