STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANG97387.1Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)    
Predicted Functional Partners:
ANG97386.1
Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.960
ANG97388.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
    0.927
ANG97389.1
Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
    0.911
ANG97385.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.893
ANG97444.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.823
ANG97279.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.822
ANG98581.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.819
ANG97160.1
Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.817
ANG98548.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.811
ANG97909.1
Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.811
Your Current Organism:
Ochrobactrum pseudogrignonense
NCBI taxonomy Id: 419475
Other names: CCUG 30717, CIP 109451, O. pseudogrignonense, Ochrobactrum pseudogrignonense Kampfer et al. 2007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.