STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANG99455.1Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (247 aa)    
Predicted Functional Partners:
ANG99120.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.836
ANG99121.1
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.825
ANG98728.1
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.820
ANG99375.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.820
ANG99385.1
Nickel transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.819
ANG96891.1
Nickel transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.818
ANG98490.1
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.818
ANG98729.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.815
ANG97223.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.808
ANG99386.1
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.807
Your Current Organism:
Ochrobactrum pseudogrignonense
NCBI taxonomy Id: 419475
Other names: CCUG 30717, CIP 109451, O. pseudogrignonense, Ochrobactrum pseudogrignonense Kampfer et al. 2007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.