STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCX76916.1FHA domain-containing protein. (597 aa)    
Predicted Functional Partners:
SCX76872.1
Serine/threonine protein kinase.
 
 
 
 0.972
SCY66788.1
Predicted ATPase.
  
 0.939
SCX76886.1
FHA domain-containing protein.
 
     0.912
SCY38975.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 
 0.872
SCY04179.1
TPR repeat-containing protein.
  
 0.848
SCY40106.1
Tetratricopeptide repeat-containing protein.
  
 0.848
SCY57686.1
Signal transduction histidine kinase.
  
 0.848
SCY87399.1
PAS domain S-box-containing protein.
  
 
 0.840
SCY48865.1
Signal transduction histidine kinase.
  
 
 0.835
SCY83839.1
Tetratricopeptide repeat-containing protein.
  
 0.832
Your Current Organism:
Desulfoluna spongiiphila
NCBI taxonomy Id: 419481
Other names: D. spongiiphila, DSM 17682, Desulfoluna spongiiphila Ahn et al. 2009, strain AA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.