STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCX81932.1Glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family. (515 aa)    
Predicted Functional Partners:
SCX81904.1
Trimethylamine:corrinoid methyltransferase; Belongs to the trimethylamine methyltransferase family.
       0.701
SCX81944.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
       0.603
SCX81879.1
Choline/glycine/proline betaine transport protein/glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family.
 
    
0.543
SCX81967.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
       0.475
Your Current Organism:
Desulfoluna spongiiphila
NCBI taxonomy Id: 419481
Other names: D. spongiiphila, DSM 17682, Desulfoluna spongiiphila Ahn et al. 2009, strain AA1
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