STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCX75762.1Hypothetical protein. (322 aa)    
Predicted Functional Partners:
SCX75733.1
Hypothetical protein.
 
  
 0.988
SCX75742.1
P2-like prophage tail protein X.
 
  
 0.988
SCX75661.1
Hypothetical protein.
 
 
 0.981
SCX75700.1
Hypothetical protein.
 
 
 0.960
SCX75686.1
Phage tail-collar fibre protein.
 
  
 0.944
SCX84924.1
Phage Tail Collar Domain.
 
  
 0.936
SCX75704.1
Hypothetical protein.
 
  
 0.930
SCX75668.1
Phage-related baseplate assembly protein.
 
  
 0.926
SCX75677.1
Phage tail protein, P2 protein I family.
 
  
 0.925
SCX75636.1
Phage baseplate assembly protein V.
 
  
 0.921
Your Current Organism:
Desulfoluna spongiiphila
NCBI taxonomy Id: 419481
Other names: D. spongiiphila, DSM 17682, Desulfoluna spongiiphila Ahn et al. 2009, strain AA1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.