STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCX85219.1Phage tail tape measure protein, TP901 family, core region. (325 aa)    
Predicted Functional Partners:
SCY66788.1
Predicted ATPase.
  
 0.859
SCY27762.1
Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.854
SCX85184.1
Hypothetical protein.
 
     0.818
SCX83497.1
PAS domain S-box-containing protein.
   
  0.815
SCY57686.1
Signal transduction histidine kinase.
  
 0.799
SCY63160.1
PAS domain S-box-containing protein.
   
 0.759
SCX85165.1
Hypothetical protein.
 
     0.752
SCY70821.1
PAS domain S-box-containing protein.
   
  0.744
SCY52880.1
Two-component system, NarL family, sensor histidine kinase EvgS.
   
 0.741
SCY84843.1
PAS domain S-box-containing protein.
  
  0.738
Your Current Organism:
Desulfoluna spongiiphila
NCBI taxonomy Id: 419481
Other names: D. spongiiphila, DSM 17682, Desulfoluna spongiiphila Ahn et al. 2009, strain AA1
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