STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCX90142.1Dihydrolipoamide dehydrogenase. (712 aa)    
Predicted Functional Partners:
SCY58604.1
2-oxoisovalerate dehydrogenase E1 component.
 0.999
msrA
Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
  
 0.948
SCX79035.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 0.914
SCY55326.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 0.914
SCY03600.1
Small redox-active disulfide protein 2.
  
 0.909
SCY07990.1
Small redox-active disulfide protein 2.
  
 0.909
SCY08008.1
Thioredoxin 1; Belongs to the thioredoxin family.
  
 0.909
SCX90122.1
Protein of unknown function, DUF547.
     0.902
SCX96904.1
Amino acid adenylation domain-containing protein.
  
 0.893
SCY32123.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
0.867
Your Current Organism:
Desulfoluna spongiiphila
NCBI taxonomy Id: 419481
Other names: D. spongiiphila, DSM 17682, Desulfoluna spongiiphila Ahn et al. 2009, strain AA1
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