STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY05649.1Heme-degrading monooxygenase HmoA. (107 aa)    
Predicted Functional Partners:
SCY05629.1
methylated-DNA-[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.
       0.794
SCY05606.1
DNA-3-methyladenine glycosylase II.
       0.793
SCX96904.1
Amino acid adenylation domain-containing protein.
  
 
 0.633
SCY67782.1
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
     
 0.586
SCY81252.1
Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family.
    
 0.582
SCY23221.1
Alpha/beta hydrolase family protein.
     
 0.559
SCY88968.1
Kynurenine formamidase.
 
  
  0.549
SCY54637.1
Enoyl-(Acyl carrier protein) reductase.
  
 
 0.499
SCY54624.1
Nitronate monooxygenase.
  
 
 0.491
SCY76630.1
Kynurenine formamidase.
    
  0.477
Your Current Organism:
Desulfoluna spongiiphila
NCBI taxonomy Id: 419481
Other names: D. spongiiphila, DSM 17682, Desulfoluna spongiiphila Ahn et al. 2009, strain AA1
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