STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY06087.1Di-and tricarboxylate transporter. (463 aa)    
Predicted Functional Partners:
SCY06070.1
Thioredoxin reductase (NADPH).
 
     0.834
SCY06009.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
 
    0.779
SCY06047.1
Thioredoxin 1.
 
     0.759
SCY06024.1
Arylsulfatase A.
 
     0.733
SCX84716.1
glutamate:Na+ symporter, ESS family.
  
  
 0.730
SCY87933.1
NitT/TauT family transport system substrate-binding protein/sulfonate transport system substrate-binding protein.
 
     0.728
SCY34673.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
  
     0.520
SCX90968.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
  
    0.498
SCY78274.1
Hypothetical protein.
  
     0.450
SCX93407.1
NitT/TauT family transport system substrate-binding protein.
 
     0.433
Your Current Organism:
Desulfoluna spongiiphila
NCBI taxonomy Id: 419481
Other names: D. spongiiphila, DSM 17682, Desulfoluna spongiiphila Ahn et al. 2009, strain AA1
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