STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY01359.1Hypothetical protein. (219 aa)    
Predicted Functional Partners:
SCX83497.1
PAS domain S-box-containing protein.
  
 0.999
SCY12674.1
PAS domain S-box-containing protein.
  
 0.999
SCY19083.1
Signal transduction histidine kinase.
  
 0.999
SCY32427.1
Signal transduction histidine kinase.
  
 0.999
SCY38975.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 0.999
SCY48865.1
Signal transduction histidine kinase.
  
 0.999
SCY52880.1
Two-component system, NarL family, sensor histidine kinase EvgS.
  
 0.999
SCY57686.1
Signal transduction histidine kinase.
  
 0.999
SCY58120.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.999
SCY63160.1
PAS domain S-box-containing protein.
  
 0.999
Your Current Organism:
Desulfoluna spongiiphila
NCBI taxonomy Id: 419481
Other names: D. spongiiphila, DSM 17682, Desulfoluna spongiiphila Ahn et al. 2009, strain AA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.