STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY14510.1Hypothetical protein. (964 aa)    
Predicted Functional Partners:
SCY14493.1
Protein of unknown function.
 
   0.951
SCY66788.1
Predicted ATPase.
  
 0.859
SCY27762.1
Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.854
SCY14447.1
ATPase family associated with various cellular activities (AAA).
 
 
 0.819
SCX83497.1
PAS domain S-box-containing protein.
   
  0.815
SCY15396.1
Protein of unknown function.
 
   
 0.811
SCY15160.1
Hypothetical protein.
 
   
 0.809
SCY15323.1
Conserved hypothetical phage tail region protein.
 
   
 0.807
SCY15253.1
Zn-binding Pro-Ala-Ala-Arg (PAAR) domain-containing protein, incolved in TypeVI secretion.
 
   
 0.806
SCY15209.1
Baseplate J-like protein.
 
   
 0.805
Your Current Organism:
Desulfoluna spongiiphila
NCBI taxonomy Id: 419481
Other names: D. spongiiphila, DSM 17682, Desulfoluna spongiiphila Ahn et al. 2009, strain AA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.