STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY15877.1Sugar (pentulose or hexulose) kinase. (515 aa)    
Predicted Functional Partners:
SCY66277.1
Ribulose-5-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
 
  
 0.893
SCY15898.1
Alkyldihydroxyacetonephosphate synthase.
 
   
 0.806
SCY15821.1
Glycerol-3-phosphate dehydrogenase.
  
 0.784
SCY58149.1
Xylulokinase.
  
  
 
0.719
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
 
0.692
SCY58177.1
Ribulose-5-phosphate 4-epimerase/Fuculose-1-phosphate aldolase.
  
 
 0.692
SCY58193.1
L-fuculose-phosphate aldolase.
  
 
 0.692
SCY70242.1
Glycerol 3-phosphate dehydrogenase (quinone) subunit A.
 
  
 0.660
SCY63457.1
L-fuculose-phosphate aldolase.
 
 
 0.655
tdh
L-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family.
  
 
 0.599
Your Current Organism:
Desulfoluna spongiiphila
NCBI taxonomy Id: 419481
Other names: D. spongiiphila, DSM 17682, Desulfoluna spongiiphila Ahn et al. 2009, strain AA1
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