STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY21129.1Aldehyde dehydrogenase, iron-sulfur subunit. (761 aa)    
Predicted Functional Partners:
SCY83877.1
NADPH-dependent glutamate synthase beta chain.
 
0.993
SCX79035.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.982
SCY55326.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.982
SCY83868.1
Glutamate synthase (NADPH/NADH) large chain; Belongs to the glutamate synthase family.
  
 0.979
SCY83854.1
Glutamate synthase (NADPH) GltB1 subunit.
  
 0.973
SCY21451.1
Formate dehydrogenase major subunit.
 
0.967
SCY21188.1
Aldehyde dehydrogenase, molybdenum-binding subunit apoprotein.
 
  
 0.964
SCY21105.1
Hypothetical protein.
 
     0.955
SCX93312.1
Glutamate synthase (NADPH) GltB2 subunit.
 
 0.951
SCY55355.1
Iron-sulfur cluster-binding protein.
  
 0.936
Your Current Organism:
Desulfoluna spongiiphila
NCBI taxonomy Id: 419481
Other names: D. spongiiphila, DSM 17682, Desulfoluna spongiiphila Ahn et al. 2009, strain AA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.