STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY27081.1Hypothetical protein. (371 aa)    
Predicted Functional Partners:
SCY27099.1
Nicotinamidase-related amidase.
 
    0.869
pncB
Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.
    
 0.763
nadE
NAD+ synthase/NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
 0.714
SCY43566.1
Competence/damage-inducible protein cinA; Belongs to the CinA family.
    
 0.711
SCX79035.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.680
SCY55326.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.680
SCY54637.1
Enoyl-(Acyl carrier protein) reductase.
  
 
 0.667
SCY64356.1
Aminomethyltransferase.
    
 0.657
SCY87299.1
8-oxo-dGTP diphosphatase; Belongs to the Nudix hydrolase family.
  
   
 0.648
SCY19083.1
Signal transduction histidine kinase.
    
  0.643
Your Current Organism:
Desulfoluna spongiiphila
NCBI taxonomy Id: 419481
Other names: D. spongiiphila, DSM 17682, Desulfoluna spongiiphila Ahn et al. 2009, strain AA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.