STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY34513.1Methyl-accepting chemotaxis protein. (668 aa)    
Predicted Functional Partners:
SCX94094.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.982
SCY06418.1
Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator).
 
 0.981
SCY34412.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.937
SCX94080.1
CheW protein.
 
 0.922
SCY34372.1
Purine-binding chemotaxis protein CheW.
 
 0.895
SCY38975.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 0.885
SCY48865.1
Signal transduction histidine kinase.
  
 0.884
SCX94035.1
Chemotaxis protein methyltransferase CheR.
 0.877
cheB
Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 0.873
SCY06432.1
Purine-binding chemotaxis protein CheW.
 
 0.869
Your Current Organism:
Desulfoluna spongiiphila
NCBI taxonomy Id: 419481
Other names: D. spongiiphila, DSM 17682, Desulfoluna spongiiphila Ahn et al. 2009, strain AA1
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