STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY33141.1Chromosome partitioning ATPase, Mrp family, contains Fe-S cluster. (217 aa)    
Predicted Functional Partners:
SCY73754.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
 
 0.924
SCX96464.1
Sugar transferase, PEP-CTERM system associated/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
 
 0.912
SCY33163.1
Hypothetical protein.
  
 
 0.873
SCY30367.1
Chromosome partitioning ATPase, Mrp family, contains Fe-S cluster.
 
 
 0.846
SCY73821.1
Capsular exopolysaccharide family.
 
 
 0.846
SCY66502.1
Protein-tyrosine phosphatase.
 
  
 0.841
SCY73807.1
Polysaccharide export outer membrane protein.
 
 0.781
SCX95006.1
Capsular exopolysaccharide family.
  
     0.773
SCY42905.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
 
 0.762
SCX95071.1
Polysaccharide export outer membrane protein.
 
 0.745
Your Current Organism:
Desulfoluna spongiiphila
NCBI taxonomy Id: 419481
Other names: D. spongiiphila, DSM 17682, Desulfoluna spongiiphila Ahn et al. 2009, strain AA1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.