STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY50665.1Hypothetical protein. (601 aa)    
Predicted Functional Partners:
SCY11289.1
Short chain enoyl-CoA hydratase.
 
 0.897
SCY54637.1
Enoyl-(Acyl carrier protein) reductase.
  
 0.886
SCY22944.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.874
SCY69957.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.874
SCX79035.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 0.872
SCY55326.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 0.872
SCY54624.1
Nitronate monooxygenase.
  
 
 0.848
SCY89549.1
Electron transfer flavoprotein alpha subunit apoprotein.
 
 0.797
SCX96904.1
Amino acid adenylation domain-containing protein.
  
 
 0.778
SCY18489.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.772
Your Current Organism:
Desulfoluna spongiiphila
NCBI taxonomy Id: 419481
Other names: D. spongiiphila, DSM 17682, Desulfoluna spongiiphila Ahn et al. 2009, strain AA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.