STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY51421.1Sugar phosphate permease. (441 aa)    
Predicted Functional Partners:
SCY51393.1
Hypothetical protein.
       0.625
SCY51438.1
N-acyl-D-amino-acid deacylase.
       0.539
SCY40009.1
ABC-type Fe3+ transport system, substrate-binding protein.
  
  
 0.521
SCY40216.1
iron(III) transport system substrate-binding protein.
  
  
 0.521
SCY64132.1
iron(III) transport system substrate-binding protein.
  
  
 0.521
SCY54637.1
Enoyl-(Acyl carrier protein) reductase.
  
 
 0.492
SCY66788.1
Predicted ATPase.
  
  
 0.465
SCY22313.1
Chorismate mutase / prephenate dehydratase.
   
 
 0.443
SCX80285.1
Purine nucleosidase.
  
  
 0.420
SCY32450.1
4Fe-4S dicluster domain-containing protein.
  
 
  0.418
Your Current Organism:
Desulfoluna spongiiphila
NCBI taxonomy Id: 419481
Other names: D. spongiiphila, DSM 17682, Desulfoluna spongiiphila Ahn et al. 2009, strain AA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.