STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY49083.1NADPH-dependent glutamate synthase beta chain. (596 aa)    
Predicted Functional Partners:
SCX79035.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
 
 0.999
SCX97851.1
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
 
 0.999
SCY21522.1
NADH-quinone oxidoreductase subunit F/NAD(P)H dehydrogenase (quinone)/NADP-reducing hydrogenase subunit HndC.
 
 0.999
SCY55326.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 0.999
SCY83868.1
Glutamate synthase (NADPH/NADH) large chain; Belongs to the glutamate synthase family.
 
 0.998
SCY83877.1
NADPH-dependent glutamate synthase beta chain.
 
0.997
SCY21451.1
Formate dehydrogenase major subunit.
 
0.995
SCY54637.1
Enoyl-(Acyl carrier protein) reductase.
  
 0.993
SCY73874.1
NADH-quinone oxidoreductase subunit F.
 
0.989
SCX77364.1
Dihydroorotate oxidase B, electron transfer subunit.
 0.987
Your Current Organism:
Desulfoluna spongiiphila
NCBI taxonomy Id: 419481
Other names: D. spongiiphila, DSM 17682, Desulfoluna spongiiphila Ahn et al. 2009, strain AA1
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