STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY68471.1MFS transporter, FSR family, fosmidomycin resistance protein. (400 aa)    
Predicted Functional Partners:
SCX96904.1
Amino acid adenylation domain-containing protein.
  
 
 0.774
SCY68454.1
Maltose O-acetyltransferase.
       0.773
SCY54624.1
Nitronate monooxygenase.
 
 
 0.738
SCY54637.1
Enoyl-(Acyl carrier protein) reductase.
  
 
 0.701
SCY57517.1
Hypothetical protein.
  
     0.631
SCY22313.1
Chorismate mutase / prephenate dehydratase.
  
 
 0.608
SCX82178.1
Predicted metal-binding protein.
  
     0.580
SCY86812.1
Para-aminobenzoate synthetase component 1.
   
 
 0.571
SCX96933.1
Amino acid adenylation domain-containing protein.
  
 
 0.547
SCY72152.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.539
Your Current Organism:
Desulfoluna spongiiphila
NCBI taxonomy Id: 419481
Other names: D. spongiiphila, DSM 17682, Desulfoluna spongiiphila Ahn et al. 2009, strain AA1
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