STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY85269.1Hypothetical protein. (554 aa)    
Predicted Functional Partners:
SCX82534.1
Hypothetical protein.
  
     0.698
SCY85275.1
Uncharacterized conserved protein, DUF169 family.
 
     0.613
SCY89514.1
Hypothetical protein.
  
     0.502
SCY85888.1
Hypothetical protein.
  
     0.465
SCX90001.1
Putative Fe-S cluster.
  
     0.454
SCY43316.1
Glutaconate CoA-transferase subunit A.
  
     0.451
SCY06952.1
Hypothetical protein.
 
    0.450
SCX81460.1
Hypothetical protein.
  
     0.449
SCY83472.1
Dissimilatory sulfite reductase beta subunit.
  
     0.443
SCY65218.1
Putative Fe-S cluster.
  
     0.412
Your Current Organism:
Desulfoluna spongiiphila
NCBI taxonomy Id: 419481
Other names: D. spongiiphila, DSM 17682, Desulfoluna spongiiphila Ahn et al. 2009, strain AA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.