STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY85842.1Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (359 aa)    
Predicted Functional Partners:
SCY85849.1
Iron complex transport system ATP-binding protein.
 0.998
SCY85858.1
Iron complex transport system substrate-binding protein.
 
 0.992
SCY37463.1
Iron complex transport system ATP-binding protein.
 0.991
SCY38835.1
Iron complex transport system ATP-binding protein.
 0.989
SCY37510.1
Iron complex transport system substrate-binding protein.
 
 0.972
SCY37594.1
ABC-type Fe3+-hydroxamate transport system, substrate-binding protein.
 
 0.963
SCY38874.1
Iron complex transport system substrate-binding protein.
 
 0.949
SCY28911.1
Substrate-binding protein.
  
 0.871
SCY85872.1
precorrin-8X methylmutase.
     
 0.817
cbiA-2
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
     
 0.793
Your Current Organism:
Desulfoluna spongiiphila
NCBI taxonomy Id: 419481
Other names: D. spongiiphila, DSM 17682, Desulfoluna spongiiphila Ahn et al. 2009, strain AA1
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