STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY86199.1ABC-2 type transport system ATP-binding protein. (289 aa)    
Predicted Functional Partners:
SCY86206.1
ABC-2 family transporter protein.
 
 0.988
SCY47996.1
Molybdate/tungstate transport system ATP-binding protein.
 
  
 
0.942
SCY29129.1
Osmoprotectant transport system ATP-binding protein.
 
    
0.904
SCY74224.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
  
 
0.900
SCY21394.1
ABC-2 type transport system permease protein.
 
 0.895
SCY76356.1
NitT/TauT family transport system ATP-binding protein.
 
  
 
0.886
SCY63306.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.
 
  
 
0.885
SCY63315.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
  
 
0.810
SCX81182.1
Putative spermidine/putrescine transport system ATP-binding protein/thiamine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 
0.804
SCY22544.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
  
 
0.801
Your Current Organism:
Desulfoluna spongiiphila
NCBI taxonomy Id: 419481
Other names: D. spongiiphila, DSM 17682, Desulfoluna spongiiphila Ahn et al. 2009, strain AA1
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