STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY89125.1Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN. (183 aa)    
Predicted Functional Partners:
SCY24050.1
Ethanolamine utilization protein EutN.
 
 
 
 0.905
SCY89116.1
4Fe-4S dicluster domain-containing protein.
 
  
 0.901
SCY89322.1
Ethanolamine utilization protein EutN.
 
 
 
 0.897
SCY91239.1
4Fe-4S dicluster domain-containing protein.
 
  
 0.797
SCY24181.1
SLBB domain-containing protein.
 
  
 0.767
SCY23937.1
Ethanolamine utilization protein EutM.
 
 
 
 0.764
SCY89275.1
Ethanolamine utilization protein EutM.
 
 
 
 0.763
SCY24116.1
Ethanolamine utilization protein EutM.
 
 
 
 0.760
SCY89342.1
Ethanolamine utilization protein EutM.
 
 
 
 0.756
SCY23708.1
Ethanolamine utilization protein EutP; Belongs to the EutP/PduV family.
 
  
 0.725
Your Current Organism:
Desulfoluna spongiiphila
NCBI taxonomy Id: 419481
Other names: D. spongiiphila, DSM 17682, Desulfoluna spongiiphila Ahn et al. 2009, strain AA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.