STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY89316.1Hypothetical protein. (196 aa)    
Predicted Functional Partners:
SCY89292.1
Ethanolamine utilization cobalamin adenosyltransferase.
  
    0.804
SCY89299.1
Propanediol utilization protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.
       0.784
SCY89305.1
Ethanolamine utilization protein EutJ.
       0.784
SCY89275.1
Ethanolamine utilization protein EutM.
  
    0.775
SCY89322.1
Ethanolamine utilization protein EutN.
  
    0.704
SCY89333.1
Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN.
  
    0.693
SCY89260.1
Acetaldehyde dehydrogenase (acetylating).
  
    0.503
SCY89251.1
Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN.
  
    0.476
SCY89243.1
Ethanolamine utilization protein EutQ.
  
    0.475
Your Current Organism:
Desulfoluna spongiiphila
NCBI taxonomy Id: 419481
Other names: D. spongiiphila, DSM 17682, Desulfoluna spongiiphila Ahn et al. 2009, strain AA1
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