STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY89514.1Hypothetical protein. (170 aa)    
Predicted Functional Partners:
SCY57895.1
Hypothetical protein.
  
     0.735
SCY53268.1
Putative zinc-or iron-chelating domain-containing protein.
  
     0.680
SCY83854.1
Glutamate synthase (NADPH) GltB1 subunit.
  
     0.660
SCY83868.1
Glutamate synthase (NADPH/NADH) large chain; Belongs to the glutamate synthase family.
  
     0.623
SCY83409.1
Class III cytochrome C family protein.
  
     0.607
SCY33096.1
Ribosomal protein S12 methylthiotransferase accessory factor.
  
     0.581
SCY85888.1
Hypothetical protein.
  
     0.576
SCY83877.1
NADPH-dependent glutamate synthase beta chain.
  
     0.573
SCY81372.1
AAA domain-containing protein.
  
     0.561
SCY12037.1
Methyltetrahydrofolate--corrinoid iron-sulfur protein Co-methyltransferase.
  
     0.551
Your Current Organism:
Desulfoluna spongiiphila
NCBI taxonomy Id: 419481
Other names: D. spongiiphila, DSM 17682, Desulfoluna spongiiphila Ahn et al. 2009, strain AA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.