STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN56541.1Two-component system, OmpR family, response regulator RstA. (237 aa)    
Predicted Functional Partners:
SDN56575.1
Two-component system, OmpR family, sensor histidine kinase RstB.
 
 0.998
SDO65314.1
Two-component system, NarL family, sensor histidine kinase BarA.
 
 0.991
SDN89135.1
PAS fold-containing protein.
 
 0.990
SDN63404.1
Signal transduction histidine kinase.
0.966
SDO13971.1
PAS domain S-box-containing protein.
 
 0.960
SDO74958.1
His Kinase A (phospho-acceptor) domain-containing protein.
  0.897
SDO16366.1
NAD-dependent formate dehydrogenase flavoprotein subunit.
   
 
 0.864
SDN86185.1
CheB methylesterase.
   
 0.843
SDN63466.1
Signal transduction histidine kinase.
 
 0.819
SDO87663.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
  
 0.795
Your Current Organism:
Halomonas shengliensis
NCBI taxonomy Id: 419597
Other names: CGMCC 1.6444, H. shengliensis, Halomonas shengliensis Wang et al. 2007, LMG 23897, LMG:23897, strain SL014B-85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.