STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN65632.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (251 aa)    
Predicted Functional Partners:
SDN65538.1
Sugar lactone lactonase YvrE.
 
 0.994
SDN65604.1
2-dehydro-3-deoxygalactonokinase.
 
     0.929
SDN65572.1
2-dehydro-3-deoxyphosphogalactonate aldolase.
 
     0.855
SDN82313.1
Glutamate synthase (NADPH) large subunit.
     
 0.814
SDO96131.1
Benzoate/toluate 1,2-dioxygenase reductase subunit.
   
 0.731
SDN65795.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
  
 
  0.694
SDO07854.1
4Fe-4S dicluster domain-containing protein.
    
 0.672
SDN65665.1
Galactonate dehydratase.
 
  
  0.634
SDN90998.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
  
 0.597
SDO90062.1
2-oxoisovalerate dehydrogenase E1 component.
  
 0.592
Your Current Organism:
Halomonas shengliensis
NCBI taxonomy Id: 419597
Other names: CGMCC 1.6444, H. shengliensis, Halomonas shengliensis Wang et al. 2007, LMG 23897, LMG:23897, strain SL014B-85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.