STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN70501.1Threonine/homoserine efflux transporter RhtA. (303 aa)    
Predicted Functional Partners:
SDN70433.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
  
 0.758
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
       0.740
SDO72861.1
Phage tail tube, TTP, lambda-like.
  
    0.700
SDO72803.1
Phage protein, HK97 gp10 family.
  
     0.605
SDN62353.1
Hypothetical protein.
  
     0.537
SDO45626.1
Hypothetical protein.
  
     0.534
SDO22475.1
Uncharacterized lipoprotein.
  
     0.516
SDO92902.1
Hypothetical protein.
  
     0.503
SDO63075.1
Sulfotransferase family protein.
  
     0.454
SDO00556.1
Nickel/cobalt transporter regulator.
  
     0.439
Your Current Organism:
Halomonas shengliensis
NCBI taxonomy Id: 419597
Other names: CGMCC 1.6444, H. shengliensis, Halomonas shengliensis Wang et al. 2007, LMG 23897, LMG:23897, strain SL014B-85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.