STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN72421.1Uncaracterized surface protein containing fasciclin (FAS1) repeats. (168 aa)    
Predicted Functional Partners:
SDO36094.1
Complex I intermediate-associated protein 30 (CIA30).
 
     0.804
SDO07854.1
4Fe-4S dicluster domain-containing protein.
    
 
 0.753
SDO15362.1
Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family.
 
  
 0.561
SDN72391.1
Hypothetical protein.
       0.541
SDO14931.1
Deoxyribodipyrimidine photolyase-related protein.
 
     0.472
SDO83622.1
Deoxyribodipyrimidine photo-lyase type I; Belongs to the DNA photolyase family.
 
  
 0.458
SDO15143.1
Multisubunit potassium/proton antiporter, PhaA subunit /multisubunit potassium/proton antiporter, PhaB subunit.
   
 
 0.443
SDO15167.1
Multicomponent Na+:H+ antiporter subunit A.
   
 
 0.443
SDO69527.1
Multicomponent K+:H+ antiporter subunit A.
   
 
 0.443
SDN72459.1
Hypothetical protein.
       0.416
Your Current Organism:
Halomonas shengliensis
NCBI taxonomy Id: 419597
Other names: CGMCC 1.6444, H. shengliensis, Halomonas shengliensis Wang et al. 2007, LMG 23897, LMG:23897, strain SL014B-85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.