STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN84744.1MFS transporter, DHA2 family, multidrug resistance protein. (470 aa)    
Predicted Functional Partners:
SDN92872.1
RND family efflux transporter, MFP subunit.
  
 
 0.771
SDN84660.1
Ribosomal-protein-alanine N-acetyltransferase.
       0.763
SDN84689.1
Hypothetical protein.
       0.763
SDN84717.1
Transcriptional regulator, BolA protein family; Belongs to the BolA/IbaG family.
       0.763
SDN84768.1
Hypothetical protein.
       0.624
SDO00271.1
Chorismate mutase.
   
 
 0.480
SDN72676.1
HlyD family secretion protein.
 
 
 0.455
SDO07225.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.455
lysS
lysyl-tRNA synthetase, class II; Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.417
SDO93026.1
Membrane fusion protein, adhesin transport system.
   
 
 0.411
Your Current Organism:
Halomonas shengliensis
NCBI taxonomy Id: 419597
Other names: CGMCC 1.6444, H. shengliensis, Halomonas shengliensis Wang et al. 2007, LMG 23897, LMG:23897, strain SL014B-85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.